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The best cottages in Marathon

Check out our selection of great cottages in Marathon

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Newly renovated and cozy home in the Florida Keys, hotel in Marathon

Just a 6-minute walk from Florida Keys Aquarium Encounters and 0.9 miles from Captain Hook s Marina Dive Center, Newly renovated and cozy home in the Florida Keys features accommodations in Marathon...

I love that the house had 2 bathrooms & 2 bedrooms outside was very nice pool was great very clean host was very fast on responding to any questions love that we could have a small dog she loved having a fenced in yard.
Scored 9.3
9.3
Rated wonderful
Wonderful
6 reviews
Casa Blue Pelican., hotel in Marathon

A 3-minute walk from Florida Keys Aquarium Encounters in Marathon, Casa Blue Pelican. Features accommodations with access to a hot tub and open-air bath.

Everything. Very comfortable, everything you need is here. Owners did an amazing job making it a warm, inviting place. I've stayed at dozens of booking.com rentals and this is the best I've experienced.
Scored 9.3
9.3
Rated wonderful
Wonderful
8 reviews
The Butterfly Cottage, hotel in Marathon

The Butterfly Cottage is a recently renovated vacation home in Marathon where guests can make the most of the free bikes and garden.

I enjoyed the close proximity to everything, the price and the space.
Scored 9.6
9.6
Rated exceptional
Exceptional
26 reviews
Yellowtail House, hotel in Marathon

Yellowtail House offers accommodations in Marathon, 8.1 miles from Seven Mile Bridge and 15 miles from Bahia Honda State Park.

We loved our stay at Yellowtail House! Love the accommodations. Loved the local businesses and restaurants. Would definitely stay here again.
Scored 9.2
9.2
Rated wonderful
Wonderful
5 reviews
Marathon Magic, hotel in Marathon

Marathon Magic is located in Marathon, just 5.5 miles from Captain Hook s Marina Dive Center and 6.7 miles from A Deep Blue Dive Center.

Just a beautiful property and view of the water. They had everything we could have needed or wanted for an excellent vacation.
Scored 9.6
9.6
Rated exceptional
Exceptional
5 reviews
Luna Bay Breeze, hotel in Marathon

Luna Bay Breeze is located in Marathon, just 3.5 miles from Florida Keys Aquarium Encounters and 3.6 miles from Captain Hook s Marina Dive Center.

The house was beautiful and literally had everything we could have needed. We easily fit our 20ft boat at the dock. The canal was good as deep. The location was perfectly situated in Marathon and we walked to the grocery store and to church on Sunday.
Scored 9.6
9.6
Rated exceptional
Exceptional
26 reviews
Tropical Cottages, hotel in Marathon

This Marathon, Florida hotel offers comfortable outdoor lounge areas and hammocks. The Gulf of Mexico is just one-half block from this property.

Cozy, clean, unique, and we'll appointed.....most of all....my waterfront location had a 11 manatees feeding/basking actively several yards offshore in the morning.
Scored 8.0
8.0
Rated very good
Very Good
240 reviews
Sombrero Sands, hotel in Marathon

Sombrero Sands offers accommodations in Marathon, 4.4 miles from Florida Keys Aquarium Encounters and 4.5 miles from Captain Hook s Marina Dive Center.

Easy access to the Atlantic Ocean, pool space
Scored 8.9
8.9
Rated excellent
Excellent
10 reviews
Reef House, hotel in Marathon

Reef House is located in Duck Key, just 21 miles from Upper Matecumbe Key and 24 miles from Windley Key. Guests staying at this vacation home have access to a balcony.

Beautiful views. The unit was very clean. I would consider going again.
Scored 8.6
8.6
Rated excellent
Excellent
7 reviews
Palm Breeze, hotel in Marathon

Palm Breeze offers accommodations in Duck Key, 21 miles from Upper Matecumbe Key and 24 miles from Windley Key.

The location was beautiful.. Sunsets on the water everyday
Scored 8.3
8.3
Rated very good
Very Good
21 reviews
All cottages in Marathon
Looking for a cottage?
Cottages are perfect for travelers who enjoy feeling cozy and independent in the countryside. Usually small, traditionally built houses, cottages are spread across one or two floors – making them great for families or vacations with a little more privacy.

Most booked cottages in Marathon this month

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Enjoy breakfast in Marathon!

  • Newly renovated and cozy home in the Florida Keys
    Scored 9.3
    9.3
    Rated wonderful
    Wonderful
     · 6 reviews

    Just a 6-minute walk from Florida Keys Aquarium Encounters and 0.9 miles from Captain Hook s Marina Dive Center, Newly renovated and cozy home in the Florida Keys features accommodations in Marathon...

  • Casa Blue Pelican.
    Scored 9.3
    9.3
    Rated wonderful
    Wonderful
     · 8 reviews

    A 3-minute walk from Florida Keys Aquarium Encounters in Marathon, Casa Blue Pelican. Features accommodations with access to a hot tub and open-air bath.

    Great location for a family. The host are quick to respond to any questions or concerns that arose.

  • The Butterfly Cottage
    Scored 9.6
    9.6
    Rated exceptional
    Exceptional
     · 26 reviews

    The Butterfly Cottage is a recently renovated vacation home in Marathon where guests can make the most of the free bikes and garden.

    I enjoyed the close proximity to everything, the price and the space.

  • Yellowtail House
    Breakfast options
    Scored 9.2
    9.2
    Rated wonderful
    Wonderful
     · 5 reviews

    Yellowtail House offers accommodations in Marathon, 8.1 miles from Seven Mile Bridge and 15 miles from Bahia Honda State Park.

    The two Bathrooms. The House Layout, The Splash Pool, No problem Internet. Ideal for 4 Adults and One Child (14 year old)). Convenient Parking

  • Marathon Magic
    Breakfast options
    Scored 9.6
    9.6
    Rated exceptional
    Exceptional
     · 5 reviews

    Marathon Magic is located in Marathon, just 5.5 miles from Captain Hook s Marina Dive Center and 6.7 miles from A Deep Blue Dive Center.

    This property had everything we needed, very well stocked!

  • Luna Bay Breeze
    Breakfast options
    Scored 9.6
    9.6
    Rated exceptional
    Exceptional
     · 26 reviews

    Luna Bay Breeze is located in Marathon, just 3.5 miles from Florida Keys Aquarium Encounters and 3.6 miles from Captain Hook s Marina Dive Center.

    location was ok and convient for us,but alot of industrial arouund

  • Sombrero Sands
    Breakfast options
    Scored 8.9
    8.9
    Rated excellent
    Excellent
     · 10 reviews

    Sombrero Sands offers accommodations in Marathon, 4.4 miles from Florida Keys Aquarium Encounters and 4.5 miles from Captain Hook s Marina Dive Center.

    Home from home, everything we needed for a relaxing holiday. We will definitely be booking this house for our next trip to the Florida Keys

  • Azul Paradise - Waterfront - Heated Pool - Dock

    Azul Paradise - Waterfront - Heated Pool - Dock is located in Marathon, just 31 miles from Upper Matecumbe Key and 1.8 miles from Captain Hook s Marina Dive Center.

These cottages in Marathon have options with FREE cancellation

  • Seabreeze Cove Waterfront Gem 38 foot Dock Cabana Club

    Seabreeze Cove Waterfront Gem 38 foot Dock Cabana Club offers accommodations in Marathon, 30 miles from Upper Matecumbe Key and a 19-minute walk from A Deep Blue Dive Center.

  • Tiki Time! Pool-tiki Hut-kayaks-grill-ocean View!

    Featuring a private beach area, Tiki Time! Pool-tiki Hut-kayaks-grill-ocean View! features accommodations in Marathon. This property offers access to a terrace, free private parking, and free Wifi.

  • The Toasted Coconut-pool-bikes-grill-chic!
    Free cancellation options available

    Providing free bikes, The Toasted Coconut-pool-bikes-grill-chic! provides accommodations in Marathon. This property offers access to a terrace, free private parking, and free Wifi.

  • The Hideaway-private Pool-grill-kayak-tropical!

    The Hideaway-private Pool-grill-kayak-tropical! is located in Marathon, just 5.8 miles from Florida Keys Aquarium Encounters and 24 miles from Upper Matecumbe Key.

  • Vacation Rental Florida Keys
    Free cancellation options available
    Scored 10.0
    10.0
    Rated exceptional
    Exceptional
     · 1 review

    Just a 6-minute walk from Florida Keys Aquarium Encounters and 0.8 miles from Captain Hook s Marina Dive Center, Vacation Rental Florida Keys features accommodations in Marathon with free bikes.

  • Coco Plum Oasis
    Free cancellation options available

    Coco Plum Oasis offers accommodations in Marathon, 2 miles from Florida Keys Aquarium Encounters and 29 miles from Upper Matecumbe Key. Guests may go for a swim in the private pool.

  • Keys Paradise - Marathon Florida Keys
    Free cancellation options available
    Scored 10.0
    10.0
    Rated exceptional
    Exceptional
     · 1 review

    Just a 19-minute walk from Coco Plum Beach and 1.2 miles from A Deep Blue Dive Center, Keys Paradise - Marathon Florida Keys features accommodations in Marathon with a garden.

  • The Hidden Treasure
    Free cancellation options available

    The Hidden Treasure offers accommodations in Marathon, 29 miles from Upper Matecumbe Key and a 15-minute walk from Captain Hook s Marina Dive Center.

Traveling by car? These cottages in Marathon offer free parking!

  • Tropical Cottages
    Scored 8.0
    8.0
    Rated very good
    Very Good
     · 240 reviews

    This Marathon, Florida hotel offers comfortable outdoor lounge areas and hammocks. The Gulf of Mexico is just one-half block from this property.

    Clean comfortable the place is great totally recommended

  • Ocean Breeze Oasis with great boating access

    Ocean Breeze Oasis with great boating access is located in Marathon, just 30 miles from Upper Matecumbe Key and 1.5 miles from Captain Hook s Marina Dive Center.

  • Blue Ocean Bungalow

    Offering a garden, Blue Ocean Bungalow provides accommodations in Marathon. This property offers access to a terrace and free private parking.

  • Emerald Oasis Deluxe Waterfront Gem, Heated Pool with Dock

    Emerald Oasis Deluxe Waterfront Gem, Heated Pool with Dock offers accommodations in Marathon, 1.5 miles from Florida Keys Aquarium Encounters and 28 miles from Upper Matecumbe Key.

  • New Oceanfront Luxury Home - Unit3

    New Oceanfront Luxury Home - Unit3 is located in Marathon, just 5.5 miles from Florida Keys Aquarium Encounters and 4.3 miles from Seven Mile Bridge.

  • Personal Private Resort Two Houses Sleeps 16

    Personal Private Resort Two Houses Sleeps 16 is located in Marathon, just 2.6 miles from Florida Keys Aquarium Encounters and 2.7 miles from Captain Hook s Marina Dive Center.

  • Waterfront Sunway Lagoon Huge Boat Dock

    Waterfront Sunway Lagoon Huge Boat Dock is located in Marathon, just 4.6 miles from Florida Keys Aquarium Encounters and 4.7 miles from Captain Hook s Marina Dive Center.

  • BEAUTIFUL WATER VIEW POOL GYM Room Private Dock

    BEAUTIFUL WATER VIEW POOL GYM Room Private Dock offers accommodations in Marathon, 1.7 miles from Florida Keys Aquarium Encounters and 31 miles from Upper Matecumbe Key.

FAQ about cottages in Marathon

Cottages That Guests Love in Marathon

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  • Avg. price/night: $417.95
    Scored 9.2
    9.2
    Rated wonderful
    Wonderful
     · 586 reviews
    These aqualodges are great fun and offer a chance to be really close to the water if you enjoy kayaking or fishing this is the perfect spot. The accommodation was clean, well equipped and comfortable and gave us everything we needed for our stay, including good AC to keep the place cool in the summer months. We could make use of bikes and kayaks for free, which meant that we could explore the area with ease. The pool area was also really nice. The owners of the park are really friendly and helpful too. Would definitely return.
    WillIan
    Family with young children
  • Avg. price/night: $223.88
    Scored 7.5
    7.5
    Rated good
    Good
     · 693 reviews
    Nice location. Private cottages.
    Christian
    Travelers with friends
  • Avg. price/night: $417.95
    Scored 9.2
    9.2
    Rated wonderful
    Wonderful
     · 586 reviews
    We liked the idea of being on the water as it felt like an adventure. We enjoyed the views from the deck and the fish in the clear water. We liked the fact there were free kayaks and bikes. Lovely place with chairs to watch the sunset. The aqua lodge was clean, it was small but well equipped and thought out. There were plenty of places to eat near by. We liked the location half way along the keys. Would def recommend.
    Lucy
    Family with young children
  • Scored 9.7
    9.7
    Rated exceptional
    Exceptional
     · 151 reviews
    Everything! It was a great experience and we will definitely be back! The cabins are great for a family vacation, the property has grills, kayaks, a pickleball court and a nice pool that can be enjoyed by the guests.
    Leonardo
    Family with young children
  • Scored 9.7
    9.7
    Rated exceptional
    Exceptional
     · 151 reviews
    Great cabin. My grandson loved the loft. Great to be able to have the space and doors for privacy and food for cooking and eating in or out on the picnic table. Pool was nice and clean and big.
    Kelly
    Family with young children
  • Scored 9.7
    9.7
    Rated exceptional
    Exceptional
     · 151 reviews
    Wow where to start . This place is so cute and these cabins are amazing . We loved it . Had a great time the grounds are super clean and the cabin was great for five of us it also had everything we needed . They even set us up with a boat for the day . Loved the locations . Will definitely book again . Thanks for a great stay .
    Allison
    Family with young children
  • Scored 9.7
    9.7
    Rated exceptional
    Exceptional
     · 151 reviews
    The cabin was new and nice. AC worked wonderfully. The pool was wonderful! The landscaping was well done. The marina and tiki table areas were fun. Laundry was available. We loved our stay for the week and will be back.
    Leanne
    Group
  • Avg. price/night: $256.68
    Scored 8.4
    8.4
    Rated very good
    Very Good
     · 1,531 reviews
    My stay at Captain Pips in Marathon, Florida was delightful! The rooms were cozy with a charming nautical theme.. The views of the marina added a relaxing backdrop to our vacation. With its close proximity to local attractions and eateries, it's a hidden gem in the Keys that I can't recommend enough!
    M-Sc
    Young couple
  • Avg. price/night: $417.95
    Scored 9.2
    9.2
    Rated wonderful
    Wonderful
     · 586 reviews
    The bungalow or boat house was very clean and new, they have eco friendly products that must be used. The view is beautiful, relaxing and the place it’s very quiet. My son just loved the attic bed and in general the unit it’s very confortable and cozy.
    maydelin
    Family with young children